[Smeagol-discuss] Error in electrodes
Serhan Yamacli
syamacli at gmail.com
Thu Mar 12 12:00:27 GMT 2009
Hi,
I'm trying to simulate a nanotube in Smeagol. The electrode unit cell and
atomic positions I'm using are:
%block LatticeVectors
12.8726 0.000 0.000 1
0.000 12.8726 0.000 1
0.000 0.000 2.46298 1
%endblock LatticeVectors
AtomicCoordinatesFormat Ang
%block AtomicCoordinatesAndAtomicSpecies
7.00668 4.29086 0 1 C 1
6.21123 6.21123 1.23149 1 C 2
4.29086 7.00668 0 1 C 3
2.37048 6.21123 1.23149 1 C 4
1.57504 4.29086 0 1 C 5
2.37048 2.37048 1.23149 1 C 6
4.29086 1.57504 0 1 C 7
6.21123 2.37048 1.23149 1 C 8
6.64283 5.64877 0. 1 C 9
4.99376 6.91414 1.23149 1 C 10
2.93295 6.64283 0 1 C 11
1.66758 4.99376 1.23149 1 C 12
1.93889 2.93295 0 1 C 13
3.58795 1.66758 1.23149 1 C 14
5.64877 1.93889 0. 1 C 15
6.91414 3.58795 1.23149 1 C 16
%endblock AtomicCoordinatesAndAtomicSpecies
The electrodes calculation raises the error:
"Increase the unit cell along z direction"
If I increase the unit cell along z-direction, the simulation runs without
error, but will the calculation be right when the unit cell is changed?
Regards
Serhan
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