[Smeagol-discuss] compilation

[Ivan Rungger]

Hi Lamjed,

    I have never come across this error before. If you are running a
test-system that runs in parallel on the old cluster (I suppose it
does?), and crashes on the new one, then it must have something to do
with libraries/compilers/mpi-implementation on the new cluster. But
unfortunately I do not know what it might be in more specific detail.

Cheers,

 Ivan

Lamjed Debbichi wrote:
> *Dear smeagol users
>
> i am using smeagol on new machine. To see whether the compilation of the 
> program works well,
> i have done a bulk calculation with 32 processors and Leads calculation, 
> and it works well when
> i  compare it with other machine's calculations. However, when i do the 
> transport calcuations, i get
> following message (for 8,16,32,64 processors)*
>
> * Maximum dynamic memory allocated =   103 MB
> firstiter
> siesta: reading saved Hamiltonian
> siesta: saved Hamiltonian not found
> gensvd: Leads decimation
> gensvd: Dim of H1 and S1 :    390
> gensvd: Rank of H1:            87
> gensvd: Rank of (H1,S1):      189
> gensvd: Decimated states:     114
> gensvd: Decimation from the left
> gensvd: Leads decimation
> gensvd: Dim of H1 and S1 :    390
> gensvd: Rank of H1:            87
> gensvd: Rank of (H1,S1):      189
> gensvd: Decimated states:     114
> gensvd: Decimation from the left
> gensvd: Leads decimation
> gensvd: Dim of H1 and S1 :    390
> gensvd: Rank of H1:            87
> gensvd: Rank of (H1,S1):      189
> gensvd: Decimated states:     114
> gensvd: Decimation from the left
> gensvd: Leads decimation
> gensvd: Dim of H1 and S1 :    390
> gensvd: Rank of H1:            87
> gensvd: Rank of (H1,S1):      189
> gensvd: Decimated states:     114
> gensvd: Decimation from the left
> rank 10 in job 1  r19i0n3_44341   caused collective abort of all ranks
>   exit status of rank 10: killed by signal 9
>
> *When i do the same calulations on a single processors, it works well.
>
> I want to know whether you have an idea about the origin of this problem???*
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>
>   


-- 
=================================================
Ivan Rungger,

School of Physics and CRANN,  
Trinity College Dublin,  
Dublin 2,  IRELAND  
Phone: +353-1-8968454  
Email: runggeri at tcd.ie
=================================================