[Smeagol-discuss] compilation

Lamjed Debbichi Lamjed.Debbichi at ipcms.u-strasbg.fr
Thu Feb 12 15:37:53 GMT 2009


*Dear smeagol users

i am using smeagol on new machine. To see whether the compilation of the 
program works well,
i have done a bulk calculation with 32 processors and Leads calculation, 
and it works well when
i  compare it with other machine's calculations. However, when i do the 
transport calcuations, i get
following message (for 8,16,32,64 processors)*

* Maximum dynamic memory allocated =   103 MB
firstiter
siesta: reading saved Hamiltonian
siesta: saved Hamiltonian not found
gensvd: Leads decimation
gensvd: Dim of H1 and S1 :    390
gensvd: Rank of H1:            87
gensvd: Rank of (H1,S1):      189
gensvd: Decimated states:     114
gensvd: Decimation from the left
gensvd: Leads decimation
gensvd: Dim of H1 and S1 :    390
gensvd: Rank of H1:            87
gensvd: Rank of (H1,S1):      189
gensvd: Decimated states:     114
gensvd: Decimation from the left
gensvd: Leads decimation
gensvd: Dim of H1 and S1 :    390
gensvd: Rank of H1:            87
gensvd: Rank of (H1,S1):      189
gensvd: Decimated states:     114
gensvd: Decimation from the left
gensvd: Leads decimation
gensvd: Dim of H1 and S1 :    390
gensvd: Rank of H1:            87
gensvd: Rank of (H1,S1):      189
gensvd: Decimated states:     114
gensvd: Decimation from the left
rank 10 in job 1  r19i0n3_44341   caused collective abort of all ranks
  exit status of rank 10: killed by signal 9

*When i do the same calulations on a single processors, it works well.

I want to know whether you have an idea about the origin of this problem???*


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