[Smeagol-discuss] compiling siesta in parallel
Sushil Auluck
sauluck at iitk.ac.in
Tue Mar 11 07:30:33 GMT 2008
jimmy,
thanks for your imput. now i am using mpich-1.2.6 and
i can see siesta running on 2/4/8 nodes but it bombs out
.........enclosed is what i see on the screen....
*******************************************************************************
[slakxncf at master SiH]$ mpirun -n 8 ../../Src/siesta < sih.fdf > ut8
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line
Source
siesta 0000000000F67093 Unknown Unknown Unknown
libpthread.so.0 0000003D9920C320 Unknown Unknown Unknown
siesta 0000000000F6706F Unknown Unknown Unknown
libpthread.so.0 0000003D9920C320 Unknown Unknown Unknown
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line
Source
siesta 0000000000F67093 Unknown Unknown Unknown
libpthread.so.0 0000003D9920C320 Unknown Unknown Unknown
siesta 0000000000F6706F Unknown Unknown Unknown
libpthread.so.0 0000003D9920C320 Unknown Unknown Unknown
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line
Source
siesta 0000000000F67093 Unknown Unknown Unknown
libpthread.so.0 0000003D9920C320 Unknown Unknown Unknown
siesta 0000000000F6706F Unknown Unknown Unknown
libpthread.so.0 0000003D9920C320 Unknown Unknown Unknown
*************************************************************************
when i do ldd siesta i see...........................................
[slakxncf at master Src]$ ldd siesta
libguide.so => /opt/intel/fce/10.0.023/lib/libguide.so
(0x0000002a95557000)
libmkl_lapack.so => /lib64/libmkl_lapack.so (0x0000002a956e8000)
librt.so.1 => /lib64/tls/librt.so.1 (0x0000003d9dc00000)
libsvml.so => /opt/intel/fce/10.0.023/lib/libsvml.so
(0x0000002a95e27000)
libmkl_core.so => /lib64/libmkl_core.so (0x0000002a95fa9000)
libpthread.so.0 => /lib64/tls/libpthread.so.0 (0x0000003d99200000)
libuuid.so.1 => /lib64/libuuid.so.1 (0x0000003450100000)
libm.so.6 => /lib64/tls/libm.so.6 (0x0000003d98a00000)
libc.so.6 => /lib64/tls/libc.so.6 (0x0000003d98700000)
libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x0000003d9ae00000)
libdl.so.2 => /lib64/libdl.so.2 (0x0000003d98500000)
/lib64/ld-linux-x86-64.so.2 (0x0000003d98300000)
************************************************************************************--
i am also enclosing arch.make and the output file ut8 for 8 nodes.
there is an error in ut8 which shows up after a second or so......
...please read it...sorry for troubling you...but i do want to get
siesta running in parallel....
s.auluck
****************************************************************************
Prof. Sushil Auluck Phone: +91-512-6798177(Home)
Department of Physics +91-512-6797306/7092(Work)
Indian Institute of Technology Mobile: +91-9358470794
Kanpur 208016 (UP) e-mail: sauluck at iitk.ac.in
India e-mail: sauluck at gmail.com
http://www.iitk.ac.in/phy/People/phy_facvis.html
http://www.iitk.ac.in/phy/New01/profile_SA.html
****************************************************************************
-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://lists.tchpc.tcd.ie/pipermail/smeagol-discuss/attachments/20080311/b60e2d37/attachment-0001.html
-------------- next part --------------
An embedded and charset-unspecified text was scrubbed...
Name: arch.make
Url: http://lists.tchpc.tcd.ie/pipermail/smeagol-discuss/attachments/20080311/b60e2d37/attachment-0002.pl
-------------- next part --------------
An embedded and charset-unspecified text was scrubbed...
Name: ut8
Url: http://lists.tchpc.tcd.ie/pipermail/smeagol-discuss/attachments/20080311/b60e2d37/attachment-0003.pl
More information about the Smeagol-discuss
mailing list