[Smeagol-discuss] Error while running siesta in Parallel

Jimmy Tang jtang at tchpc.tcd.ie
Sun Jun 22 09:32:19 IST 2008


Hi Kamaram,

On Sat, Jun 21, 2008 at 04:08:00PM -0400, Kamaram  Munira wrote:
> Serial simulation runs fine. However, parallel simulation gives me the 
> following error:
> 
> The index may be an incorrect argument.
> Possible sources of this problem are a missing "include 'mpif.h'",
> a misspelled MPI object (e.g., MPI_COM_WORLD instead of MPI_COMM_WORLD)
> or a misspelled user variable for an MPI object (e.g.,
> com instead of comm).
> p1_3382:  p4_error: : 9039
> 1 - <NO ERROR MESSAGE> : Could not convert index 1140850688 into a pointer
> The index may be an incorrect argument.
> Possible sources of this problem are a missing "include 'mpif.h'",
> a misspelled MPI object (e.g., MPI_COM_WORLD instead of MPI_COMM_WORLD)
> or a misspelled user variable for an MPI object (e.g.,
> com instead of comm).
> [1]  Aborting program !
> [1] Aborting program!
> p0_11786:  p4_error: interrupt SIGx: 13
> p0_11786: (6.491807) net_send: could not write to fd=4, errno = 32
> mpiexec: Warning: tasks 0-1 exited with status 1
> 
> I am running on an intel machine using mpich2.
> 
> Any suggestion would be appreciated.
> 

There some problems with running smeagol with mpich2 (MPI2.0) based
systems. I would suggest that you try building mpich1 (or an equivalent
MPI1.0 implementation) and using that instead.

also you will need to make sure all the bits and pieces such as
mpiblacs, scalapack etc... is linked against the same mpi implementation
you are using.


Jimmy.
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